Map labeled cells in brain sections onto the Allen atlas, from raw images to region-by-region counts.

By Aarushi Rao

Score behavior on the video timeline and analyze fiber photometry in one offline page: event alignment, figures, and statistics all come from the same annotated bouts.

Led by Henry Oo

Plan Neuropixels probe trajectories in 3D on the Allen atlas: coordinates, arm angles, and the regions crossed.

By Dr. Guang-Wei Zhang

Explore the Allen P56 mouse spinal cord as a rotatable 3D volume: laminae, nuclei, motor pools, and white matter tracts, with cross-sections at any named level.

By Dr. Guang-Wei Zhang

Visualize and correct multi-mouse tracking results, now with rotatable boxes and per-animal ID tags.

Developed by Dr. Guang-Wei Zhang & Henry Oo

A browser-based GUI for annotating animal behaviors in videos, frame by frame, built to power our Animal Behavioral Dataset effort.

By Dr. Can Tao

Score social interactions in mouse videos across four dedicated timeline tracks (Active, Passive, Reactive Social, and Mounting), frame by frame.

By Dr. Guang-Wei Zhang, Jaden Harris & Elizabeth Ivanova

Score parenting behaviors across seven timeline tracks: a pooled parenting prediction plus Attack, Crouch, Lick, Nest building, Retrieve, and Sniff. Built for a collaborating lab.

By Dr. Guang-Wei Zhang

A growing dataset of mouse behaviors, annotated as a community effort. Phase 1 annotation is complete and two review tasks are now open.

Project lead: Henry Oo

Annotated by

Jaden

Wissem

Alisha

Aarushi

Ava

Sabrina

Katie

Ibrahim

Siona

Asher

Elizabeth

Guang-Wei

Can Tao

Load a recording, view its spectrogram, and mark ultrasonic vocalization calls as time–frequency boxes with labels, then export the annotations.

Align audio recordings with their video streams so vocalizations and behavior can be reviewed on a common timeline.

Load a video, draw regions of interest to crop, and trim in time to the segments you need, then export the clips right in the browser. It also generates a ready-to-run ffmpeg batch script you can copy and paste to crop and trim every clip at once locally, for a lossless re-encode on any machine with ffmpeg installed.

By Dr. Guang-Wei Zhang