Tools

Open-source software developed in the Zhang Lab. Everything here runs directly in your web browser — no installation, no accounts, and your data never leaves your computer.

Neuroanatomy · Cell Mapping
NeuroFlow

A browser-based pipeline for mapping labeled cells in brain sections onto the Allen atlas — from raw images to region-by-region cell counts.

Aarushi Rao By Aarushi Rao
Details Launch
Electrophysiology · Surgery
Neuropixels Planner

An interactive 3D planner for Neuropixels probe trajectories on the Allen atlas — get bregma-relative coordinates, arm angles, and the regions the track crosses.

Guang-Wei Zhang By Dr. Guang-Wei Zhang
Details Launch
Behavior · Video Annotation
Behavioral Annotator

A browser-based GUI for annotating animal behaviors in videos, frame by frame — built to power our Animal Behavioral Dataset effort.

Can Tao By Dr. Can Tao
Details Launch

More tools coming soon

Building tools for behavior, neural data, and circuit mapping. Get in touch.